#apache-spark #keras #pyspark #hyperopt
#apache-spark #keras #pyspark #hyperopt
Вопрос:
У меня какая-то странная ошибка, на которой я застрял на несколько дней, и я не могу ее решить.
Моя цель — оценить несколько NN keras в рамках hyperopt. Для ускорения процесса оценки я использую SparkTrails (также см. http://hyperopt.github.io/hyperopt/scaleout/spark /). Для всех регрессоров scikit-learn это работает отлично. Но каждый раз, когда я использую keras nn, модель оценивается, но результат не возвращается. Следующее сообщение об ошибке, которое я получаю:
20/11/11 11:30:56 ERROR TaskSetManager: Task 0 in stage 9.0 failed 1 times; aborting job
trial task 9 failed, exception is An error occurred while calling z:org.apache.spark.api.python.PythonRDD.collectAndServeWithJobGroup.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 9.0 failed 1 times, most recent failure: Lost task 0.0 in stage 9.0 (TID 9, path executor driver): java.net.SocketException: Connection reset
at java.net.SocketInputStream.read(SocketInputStream.java:210)
at java.net.SocketInputStream.read(SocketInputStream.java:141)
at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
at java.io.BufferedInputStream.read(BufferedInputStream.java:265)
at java.io.DataInputStream.readInt(DataInputStream.java:387)
at org.apache.spark.api.python.PythonRunner$$anon$3.read(PythonRunner.scala:628)
at org.apache.spark.api.python.PythonRunner$$anon$3.read(PythonRunner.scala:621)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:456)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator.foreach(Iterator.scala:941)
at scala.collection.Iterator.foreach$(Iterator.scala:941)
at org.apache.spark.InterruptibleIterator.foreach(InterruptibleIterator.scala:28)
at scala.collection.generic.Growable.$plus$plus$eq(Growable.scala:62)
at scala.collection.generic.Growable.$plus$plus$eq$(Growable.scala:53)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:105)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:49)
at scala.collection.TraversableOnce.to(TraversableOnce.scala:315)
at scala.collection.TraversableOnce.to$(TraversableOnce.scala:313)
at org.apache.spark.InterruptibleIterator.to(InterruptibleIterator.scala:28)
at scala.collection.TraversableOnce.toBuffer(TraversableOnce.scala:307)
at scala.collection.TraversableOnce.toBuffer$(TraversableOnce.scala:307)
at org.apache.spark.InterruptibleIterator.toBuffer(InterruptibleIterator.scala:28)
at scala.collection.TraversableOnce.toArray(TraversableOnce.scala:294)
at scala.collection.TraversableOnce.toArray$(TraversableOnce.scala:288)
at org.apache.spark.InterruptibleIterator.toArray(InterruptibleIterator.scala:28)
at org.apache.spark.rdd.RDD.$anonfun$collect$2(RDD.scala:1004)
at org.apache.spark.SparkContext.$anonfun$runJob$5(SparkContext.scala:2139)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:127)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2059)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2008)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2007)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2007)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:973)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:973)
at scala.Option.foreach(Option.scala:407)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:973)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2239)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2188)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2177)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:775)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2099)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2120)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2139)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2164)
at org.apache.spark.rdd.RDD.$anonfun$collect$1(RDD.scala:1004)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:388)
at org.apache.spark.rdd.RDD.collect(RDD.scala:1003)
at org.apache.spark.api.python.PythonRDD$.collectAndServeWithJobGroup(PythonRDD.scala:183)
at org.apache.spark.api.python.PythonRDD.collectAndServeWithJobGroup(PythonRDD.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.SocketException: Connection reset
at java.net.SocketInputStream.read(SocketInputStream.java:210)
at java.net.SocketInputStream.read(SocketInputStream.java:141)
at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
at java.io.BufferedInputStream.read(BufferedInputStream.java:265)
at java.io.DataInputStream.readInt(DataInputStream.java:387)
at org.apache.spark.api.python.PythonRunner$$anon$3.read(PythonRunner.scala:628)
at org.apache.spark.api.python.PythonRunner$$anon$3.read(PythonRunner.scala:621)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:456)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator.foreach(Iterator.scala:941)
at scala.collection.Iterator.foreach$(Iterator.scala:941)
at org.apache.spark.InterruptibleIterator.foreach(InterruptibleIterator.scala:28)
at scala.collection.generic.Growable.$plus$plus$eq(Growable.scala:62)
at scala.collection.generic.Growable.$plus$plus$eq$(Growable.scala:53)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:105)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:49)
at scala.collection.TraversableOnce.to(TraversableOnce.scala:315)
at scala.collection.TraversableOnce.to$(TraversableOnce.scala:313)
at org.apache.spark.InterruptibleIterator.to(InterruptibleIterator.scala:28)
at scala.collection.TraversableOnce.toBuffer(TraversableOnce.scala:307)
at scala.collection.TraversableOnce.toBuffer$(TraversableOnce.scala:307)
at org.apache.spark.InterruptibleIterator.toBuffer(InterruptibleIterator.scala:28)
at scala.collection.TraversableOnce.toArray(TraversableOnce.scala:294)
at scala.collection.TraversableOnce.toArray$(TraversableOnce.scala:288)
at org.apache.spark.InterruptibleIterator.toArray(InterruptibleIterator.scala:28)
at org.apache.spark.rdd.RDD.$anonfun$collect$2(RDD.scala:1004)
at org.apache.spark.SparkContext.$anonfun$runJob$5(SparkContext.scala:2139)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:127)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
.
None
0%| | 0/10 [00:41<?, ?trial/s, best loss=?]
Total Trials: 10: 0 succeeded, 10 failed, 0 cancelled.
Traceback (most recent call last):
File "E:/Git/SystemidentificationTool/play/mini_example.py", line 68, in <module>
best = fmin(f_nn, space, algo=tpe.suggest, max_evals=10, trials=trials)
File "E:venvlibsite-packageshyperoptfmin.py", line 522, in fmin
trials_save_file=trials_save_file,
File "E:venvlibsite-packageshyperoptspark.py", line 274, in fmin
raise e
File "E:venvlibsite-packageshyperoptspark.py", line 270, in fmin
trials_save_file="", # not supported
File "E:venvlibsite-packageshyperoptfmin.py", line 558, in fmin
"There are no evaluation tasks, cannot return argmin of task losses."
Exception: There are no evaluation tasks, cannot return argmin of task losses.
Я создал минимальный пример кода, в котором ошибка может быть воссоздана с помощью:
from hyperopt import fmin, tpe, hp, STATUS_OK, Trials, SparkTrials
from sklearn.metrics import mean_squared_error
import sys
import numpy as np
from pandas import DataFrame
time = np.arange(0, 100, 0.1)
X = DataFrame(np.sin(time))
y = DataFrame(np.cos(time))
X_val = DataFrame(np.sin(time))
y_val = DataFrame(np.cos(time))
space = {'choice': hp.choice('num_layers',
[ {'layers':'two', },
{'layers':'three',
'units3': hp.uniform('units3', 64,1024),
'dropout3': hp.uniform('dropout3', .25,.75)}
]),
'units': hp.uniform('units', 64,1024),
'units1': hp.uniform('units1', 64,1024),
'units2': hp.uniform('units2', 64,1024),
'dropout1': hp.uniform('dropout1', .25,.75),
'dropout2': hp.uniform('dropout2', .25,.75),
'batch_size' : 28,
'nb_epochs' : 2,
'optimizer': hp.choice('optimizer',['adadelta','adam','rmsprop']),
'activation': 'relu'
}
def f_nn(params):
from keras.models import Sequential
from keras.layers.core import Dense, Dropout, Activation
from keras.optimizers import Adadelta, Adam
print ('Params testing: ', params)
model = Sequential()
model.add(Dense(params['units1'], input_dim = X.shape[1]))
model.add(Activation(params['activation']))
model.add(Dropout(params['dropout1']))
model.add(Dense(params['units2'], kernel_initializer="glorot_uniform"))
model.add(Activation(params['activation']))
model.add(Dropout(params['dropout2']))
if params['choice']['layers']== 'three':
model.add(Dense(params['choice']['units3'], kernel_initializer="glorot_uniform"))
model.add(Activation(params['activation']))
model.add(Dropout(params['choice']['dropout3']))
model.add(Dense(1))
model.add(Activation('sigmoid'))
model.compile(loss='binary_crossentropy', optimizer=params['optimizer'])
model.fit(X, y, epochs=params['nb_epochs'], batch_size=params['batch_size'])
pred_auc =model.predict(X_val)
acc = mean_squared_error(y_val, pred_auc)
print('AUC:', acc)
sys.stdout.flush()
return {'loss': -acc, 'status': STATUS_OK}
trials = SparkTrials()
best = fmin(f_nn, space, algo=tpe.suggest, max_evals=10, trials=trials)
print('best: ', best)
Мои системные настройки следующие:
python 3.7
hyperopt 0.2.5
keras 2.4.3
tensorflow 2.3.1
pyspark 3.0.1
Я использую версию java: openjdk версии «1.8.0_272» Среда выполнения OpenJDK (AdoptOpenJDK) (сборка 1.8.0_272-b10) 64-разрядная серверная виртуальная машина OpenJDK (AdoptOpenJDK) (сборка 25.272-b10, смешанный режим)
И Spark версии 3.0.1
Кто-нибудь может мне помочь, пожалуйста???
Комментарии:
1. Привет! Вы решили эту проблему?